miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|86102512|gb|BB913721.1|BB913721 TAGCATTGTGGTTTGAGTCTTCATTGCCACAATGTCTACCTCTTCCATAAACGGCTTTAGTCTTTCTTCTTTGTCACATG
CCAAAACTTCTATCAAGAAAACTACATTGAGACCCTTTGCATCTCTTAACTCTTCTTCTTCCTCTTCATCTTCTAATTTC
CCTTCTCTTATTCAAGACAAACCTGTTTTTGCTTCCTCTTCTCCTTTCATCACTCCAATTTTGAGAGAAGAAATGGGAAA
GGGTTATGAAGAAGCAATTCAAGAACTCGAGAAATTGTTGAGGGAGAAGGCCGACTTGAAAGCCACAGCAGCTGAAAAGG
TTGAACAAATAACAGCTCAACTTGGATCAGTTACAGCTCAAGCTGCAACACCATCATCATCTGATGGCATTCCAACATCT
GAAGCCTCAGAGAGGATCAAAACTGGTTTCATTCACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGA
ACTTGCCAAAGGCCAAAGCCCCCCGTATATGGTGTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGATT
TCCAGCCAGGAGAAGCTTTT




Most similar to sp|P17067|CAHC_PEA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
           sativum PE=1 SV=1
          Length = 328

 Score =  242 bits (617), Expect = 1e-63
 Identities = 128/169 (75%), Positives = 136/169 (80%), Gaps = 2/169 (1%)
 Frame = +2

Query: 80  AKTSIKKTTLRXXXXXXXXXXXXXXXXXXX--IQDKPVFASSSPFITPILREEMGKGYEE 253
           AKTS K+TTLR                     IQDKPVFASSSP ITP+LREEMGKGY+E
Sbjct: 17  AKTSTKRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMGKGYDE 76

Query: 254 AIQELEKLLREKADLKATAAEKVEQITAQLGSVTAQAATPSSSDGIPTSEASERIKTGFI 433
           AI+EL+KLLREK +LKATAAEKVEQITAQLG       T SSSDGIP SEASERIKTGF+
Sbjct: 77  AIEELQKLLREKTELKATAAEKVEQITAQLG-------TTSSSDGIPKSEASERIKTGFL 129

Query: 434 HFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAF 580
           HFKKEKYDKNPALYGELAKGQSPP+MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 130 HFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 178